Old and New Views of Protein Folding: Proceedings of the 24th Taniguchi International Symposium, Division of Biophysics, Held in Kisarazu, 3-7 March 1999
Folding of B-lactoglobolin, a case of the inconsistency of local and non-local interactions. (Y. Goto, M. Hoshino, K. Kuwata and C. A. Batt). Dynamic stability of bovine B-lactoglobulin studied by hydrogen/deuterium exchange. (V. Forge, M. Hoshino, K. Kuwata, C. A. Batt, and Y. Goto). Folding intermediates of equine B-lactoglobulin. (M. Ikeguchi). Structural analysis of protein folding intermediates by solution X-ray scattering. (M. Arau, K. Ito, K. Maki, T. Ikura, T. Inobe, H. Kihara, Y. Amemiya and K. Kuwajima). Nonnative structure of proteins and its implications for protein folding. (K. Soda and Y. Seki). Dynamics of a-helices, B-hairpins and loops. (J. Hofrichter, P. A. Thompson, V. Muñoz, G. S. Jas, E. Henry, S. J. Hagen, L. Lapidus and W. A. Eaton). Kinetic and structural characterization of early events in protein folding. (H. Roder, M. C. R. Shastry, J. M. Sauder and S.-H. Park). CD measurements on the early folding intermediate of cytochrome c using the fast flow mixer. (S. Takahashi, S. Akiyama, K. Ishimori and I. Morishima). Fast protein dynamics probed by vibrational spectroscopy. (Y. Mizutani, K. Yamamoto and T. Kitagawa). The consistency principle revisited. (N. Go). Complete structure reconstruction for model proteins using mutation calorimetry. (M. P. Morrissey and E. I. Shakhnovich). Site resolved landscape theory of fast folding proteins. (S. Takada). Hierarchy and connectivity in the folding funnel. (H. K. Nakamura and M. Sasai). The folding mechanisms of a-lactalbumin and Ca - binding Iysozyme. (K. Kuwajima, M. Arai, M. Mizuguchi, T. Koshiba and K. Nitta). Determinants of the native-like tertiary topology in the a-lactakbumin molten globule. (Z.-y. Peng). Kinetic folding reactions and molecular dynamics simulations of a-lactalbumin. (T. Yoda, M. Saito, M. Arai, K. Horii, K. Tsumoto, M. Matsushima, I. Kumagai, T. K. Chaudhuri and K. Kuwajima). Folding-unfolding processes of four species of 3SS-variant of lysozyme - the role of an individual disulfide bridge. (A. Yakota, Y. Noda, H. Tachibana and S.-I. Segawa). Evaluation of some factors that contribute to conformational stability of a protein using database of stability/structure. (K. Yutani, K. Takano and J. Funahashi). Computational analysis of protein thermal stability and dennatured state. (Y. Sugita). Hydrophobic effects: roles of water and denaturants. /M. Ikeguchi, S. Nakamura and K. Shimizu). Effects of deletion or insertions on the structure, stability and function of staphylococcal nuclease. (M. Kataoka, J. Tunoki and H. Takahara). Statistical analysis of unfolding process of protein G BI domain with 50 runs of molecular dynamics simulations. (T. Takahashi, A. Tanaka and K. Nagayama). Protein folding simulations by generalized-ensemble algorithms. (Y. Okamoto). Protein folding and genome evolution. (M. Go and K. Yura). Symmetry in protein folds: implication in evolution and folding. (K. Kinoshita, A. Kidera and N. Go). Multistate kinetics of folding and unfolding of barstar. (A. K. Bhuyan and J. B. Udgaonkar). Equilibrium and kinetics of folding of staphylococcal nuclease and its proline mutants. (K. Maki, T. Ikura, A. Mohs and K. Kuwajima). Cold denaturation and folding/unfolding of a protein at low temperature. (A. Tamura). Folding elements in dihydrofolate reductase suggested by circular permutation analysis. (M. Iwakura). Thermodynamic analysis of protein induced folding upon DNA binding. (M. Oda, K. Furukawa, K. Ogata, A. Sarai and H. Nakamura). High pressure NMR study on protein dynamics and folding. (K. Akasaka).
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Folding of Plactoglobulin a case of the inconsistency of local and nonlocal interactions
Folding intermediates of equine Plactoglobulin
Nonnative structure of proteins and its implications for protein folding
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1999 Elsevier Science a-helical a-helix a-LA amino acid Arai Editors atoms barnase binding Biochemistry Biol burst-phase calculated cavity CD spectra Chem compact concentration conformation coordination number cytochrome denatured disulfide domain dynamics Elsevier Science B.V. equilibrium unfolding experimental Figure fluorescence folding and unfolding folding elements folding intermediate folding process folding rate formation free energy function GdnHCl helical helix human lysozymes hydration hydrogen bonds hydrophobic hydrophobic effects indicates interactions introns kcal/mol Kuwajima lysozyme measured metLYZ module molecular molten globule mutant mutant proteins myoglobin native structure native-like observed P-lactoglobulin P-sheet parameters peptide bonds phase Phys proline protein folding rate constant refolding kinetics region residues secondary structure sequence shown shows side chains simulations SNase solution solvent spectrum stability stopped-flow studies temperature tertiary structure thermal thermodynamic triNAG unfolding rate unfolding transition urea values Views of Protein water molecules wild type X-ray scattering